Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911652.1_cds_XP_016461684.1_54981
CDS Infomation

[gene=LOC107784989] [db_xref=GeneID:107784989] [protein=neoxanthin synthase, chloroplastic-like] [protein_id=XP_016461684.1] [location=complement(81200..82714)] [gbkey=CDS]
Sequence

ATGGAAACTCTTCTCAAACCTTTTCCATCTCCTTTACTTTTCACTCCTACACCTCACAGG
TCTATTTTTCAACTGAATTCTACTTTTCTGAATCCAACCACCCAGAACTTTTCAAGAAAA
GTTCATCGCAGAAACAAAAGTAGTAGTAACAAATTTTGTAGCTTTCTTGACTTAGCACCC
ACATCAAAACCAGAGTCTTTAGATGTTGACATCTCATGGGTTGATCCTAATTCGGGCCGG
GCTCTATTCGACGTGATCATCATCGGAGCTGGTCCTGCGGGCCTCCGGCTAGCTGAGCAA
GTATCAAGATATGGTATTAAGGTATGTTGTGTTGACCNATGTTGTGTTGACTCTTCACCA
CTTTCCATGTGGCCAAATAATTATGGTGTTTGGGTTGATGAGTTTGAGAAGTTAGGATTG
GAAGATTGTTTAGATCATAAGTGGCCTATGACTTGTGTTCATATAAATGATAACAAGACT
AAGTATTTGGGAAGACCATATGGTAGAGTCAGTAGAAAAAAGTTGAAGTTGAAATTGTTG
AATAGTTGTGTTGATAATGGAGGGAAGTTTTATAAAGCCAAGGTTTGGAAAGTGGAGCAT
GAAGAATTTGAGTCTTCAGTTGTTTGTGATGATGGTAGGAAGATAAGGGGTAGTTTGATT
GTAGATGCAAGTGGTTTTGCTAGTCCTTTTATAGAATATGACAAGCCAAGAAACCATGGT
TATCAAATAGCTCATGGGATTTTAGCACAAGTGGATAATCATCCATTTGATTTGGATAAA
ATGGTGCTTATGGATTGGAGGGATTCTCATCTGGGAAATGAGCCATATTTGAGGGTGAAC
AATACTAAAGAACCAACATTCTTGTATGTGATGCCATTTGATAGGAATTTGGTATTCTTG
GAAGAGACTTCTTTGGTGAGTCGGCCTGTGCTATCGTATAGGGAAGTGAAAAATAGGATG
GTGGCAAGGTTAAGGCATTTGGGGATCAAAGTGACAAGTGTTATTGAGGATGAGAAATGT
GTGATCCCCATGGGAGGACCACTTCCGCGGATCCCTCAAAATGTTATGGCAATTGGTGGA
AATTCAGGGATAGTTCATCCATCGACAGGGTACATGGTGGCTCGGAGCATGGCATTGGCA
CCAGTTTTGGCTGAGGCCATTGCTGAGAGCCTCGGCACAACCAGAATGATAAGAGGATCT
CCACTTTACCATAAAGTTTGGAATGGTTTGTGGCCTCTAGAGAGAAGAAGTGTGAGAGAA
TGTTACTCTTTTGGGATGGAGACTTTGTTGAAGCTTGATTTGAAAGGGACTAGGAGATTG
TTTGATGCTTTCTTTGATCTTGATCCCAAATACTGGCAAGGGTTCCTTTCCTCAAGGTTG
TCTGTCAAAGAACTTGCTATGCTTAGCTTGTACCTTTTTGGGCATGCCTCAAATTTGGCT
AGGTTGGATATTGTTACAAAATGCCCGGTGCCCTTGGTTAAAATGATTGGAAATCTAGCA
GTAGAGACCATTTGA

Peptide Sequence

PEP ID

XP_016461684.1
PEP Infomation

PREDICTED: neoxanthin synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

METLLKPFPSPLLFTPTPHRSIFQLNSTFLNPTTQNFSRKVHRRNKSSSNKFCSFLDLAP
TSKPESLDVDISWVDPNSGRALFDVIIIGAGPAGLRLAEQVSRYGIKVCCVDXCCVDSSP
LSMWPNNYGVWVDEFEKLGLEDCLDHKWPMTCVHINDNKTKYLGRPYGRVSRKKLKLKLL
NSCVDNGGKFYKAKVWKVEHEEFESSVVCDDGRKIRGSLIVDASGFASPFIEYDKPRNHG
YQIAHGILAQVDNHPFDLDKMVLMDWRDSHLGNEPYLRVNNTKEPTFLYVMPFDRNLVFL
EETSLVSRPVLSYREVKNRMVARLRHLGIKVTSVIEDEKCVIPMGGPLPRIPQNVMAIGG
NSGIVHPSTGYMVARSMALAPVLAEAIAESLGTTRMIRGSPLYHKVWNGLWPLERRSVRE
CYSFGMETLLKLDLKGTRRLFDAFFDLDPKYWQGFLSSRLSVKELAMLSLYLFGHASNLA
RLDIVTKCPVPLVKMIGNLAVETI

Transcript Sequence

Gene sequence data has not been registered.